STRINGSTRING
MDS_2081 MDS_2081 MDS_2082 MDS_2082 MDS_1792 MDS_1792 MDS_3818 MDS_3818 MDS_3141 MDS_3141 MDS_3576 MDS_3576 MDS_2080 MDS_2080 MDS_2083 MDS_2083 MDS_1840 MDS_1840 MDS_2079 MDS_2079 MDS_3508 MDS_3508
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_2081Short-chain dehydrogenase/reductase SDR. (243 aa)    
Predicted Functional Partners:
MDS_2082
DsbA oxidoreductase.
 
     0.838
MDS_1792
Amino acid adenylation domain-containing protein.
  
  
 0.823
MDS_3818
Glutathione S-transferase-like protein.
  
  
 0.609
MDS_3141
Short-chain dehydrogenase/reductase SDR.
 
  
 0.606
MDS_3576
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.601
MDS_2080
TetR family transcriptional regulator.
       0.562
MDS_2083
Hypothetical protein.
       0.544
MDS_1840
Flagellar protein FlaG protein.
    
   0.468
MDS_2079
Hypothetical protein; Belongs to the UPF0502 family.
       0.462
MDS_3508
Putative short-chain dehydrogenase.
 
  
 0.433
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.