Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0892 | MDS_1089 | MDS_0892 | MDS_1089 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | 0.901 |
MDS_0892 | MDS_2657 | MDS_0892 | MDS_2657 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 5'-nucleotidase. | 0.900 |
MDS_0892 | MDS_3125 | MDS_0892 | MDS_3125 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | Nucleoside triphosphate pyrophosphohydrolase. | 0.909 |
MDS_0892 | nadD | MDS_0892 | MDS_4106 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.945 |
MDS_0892 | nadE | MDS_0892 | MDS_1466 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.402 |
MDS_0892 | nudC | MDS_0892 | MDS_2224 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | NADH pyrophosphatase; Belongs to the Nudix hydrolase family. NudC subfamily. | 0.905 |
MDS_0892 | pncB | MDS_0892 | MDS_1467 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.951 |
MDS_0892 | surE | MDS_0892 | MDS_3301 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.906 |
MDS_1089 | MDS_0892 | MDS_1089 | MDS_0892 | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.901 |
MDS_1089 | MDS_2657 | MDS_1089 | MDS_2657 | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | 5'-nucleotidase. | 0.900 |
MDS_1089 | MDS_3125 | MDS_1089 | MDS_3125 | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | Nucleoside triphosphate pyrophosphohydrolase. | 0.907 |
MDS_1089 | nadD | MDS_1089 | MDS_4106 | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.900 |
MDS_1089 | nudC | MDS_1089 | MDS_2224 | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | NADH pyrophosphatase; Belongs to the Nudix hydrolase family. NudC subfamily. | 0.911 |
MDS_1089 | pncB | MDS_1089 | MDS_1467 | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.915 |
MDS_1089 | surE | MDS_1089 | MDS_3301 | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.926 |
MDS_2657 | MDS_0892 | MDS_2657 | MDS_0892 | 5'-nucleotidase. | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.900 |
MDS_2657 | MDS_1089 | MDS_2657 | MDS_1089 | 5'-nucleotidase. | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | 0.900 |
MDS_2657 | MDS_3125 | MDS_2657 | MDS_3125 | 5'-nucleotidase. | Nucleoside triphosphate pyrophosphohydrolase. | 0.900 |
MDS_2657 | nadD | MDS_2657 | MDS_4106 | 5'-nucleotidase. | Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.900 |
MDS_2657 | nudC | MDS_2657 | MDS_2224 | 5'-nucleotidase. | NADH pyrophosphatase; Belongs to the Nudix hydrolase family. NudC subfamily. | 0.911 |
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