Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_2116 | MDS_2222 | MDS_2116 | MDS_2222 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.935 |
MDS_2116 | MDS_2233 | MDS_2116 | MDS_2233 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | Alcohol dehydrogenase. | 0.926 |
MDS_2116 | MDS_2614 | MDS_2116 | MDS_2614 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase. | 0.953 |
MDS_2116 | MDS_2639 | MDS_2116 | MDS_2639 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | Methylcitrate synthase; Belongs to the citrate synthase family. | 0.914 |
MDS_2116 | MDS_2861 | MDS_2116 | MDS_2861 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase-isomerase. | 0.929 |
MDS_2116 | MDS_3611 | MDS_2116 | MDS_3611 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | Hypothetical protein. | 0.933 |
MDS_2116 | MDS_3947 | MDS_2116 | MDS_3947 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.903 |
MDS_2116 | fadB | MDS_2116 | MDS_1633 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.958 |
MDS_2116 | mmsA | MDS_2116 | MDS_1433 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | Methylmalonate-semialdehyde dehydrogenase. | 0.918 |
MDS_2116 | mmsA-2 | MDS_2116 | MDS_4000 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | Methylmalonate-semialdehyde dehydrogenase. | 0.918 |
MDS_2222 | MDS_2116 | MDS_2222 | MDS_2116 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | 0.935 |
MDS_2222 | MDS_2233 | MDS_2222 | MDS_2233 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Alcohol dehydrogenase. | 0.909 |
MDS_2222 | MDS_2614 | MDS_2222 | MDS_2614 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | enoyl-CoA hydratase. | 0.960 |
MDS_2222 | MDS_2861 | MDS_2222 | MDS_2861 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | enoyl-CoA hydratase-isomerase. | 0.923 |
MDS_2222 | MDS_3611 | MDS_2222 | MDS_3611 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Hypothetical protein. | 0.910 |
MDS_2222 | fadB | MDS_2222 | MDS_1633 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.932 |
MDS_2233 | MDS_2116 | MDS_2233 | MDS_2116 | Alcohol dehydrogenase. | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | 0.926 |
MDS_2233 | MDS_2222 | MDS_2233 | MDS_2222 | Alcohol dehydrogenase. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.909 |
MDS_2233 | MDS_2614 | MDS_2233 | MDS_2614 | Alcohol dehydrogenase. | enoyl-CoA hydratase. | 0.909 |
MDS_2233 | MDS_2639 | MDS_2233 | MDS_2639 | Alcohol dehydrogenase. | Methylcitrate synthase; Belongs to the citrate synthase family. | 0.912 |
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