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MDS_2362 MDS_2362 glcB-2 glcB-2 glcB glcB acnA acnA MDS_0215 MDS_0215 acnB acnB gcl gcl MDS_3965 MDS_3965 MDS_3420 MDS_3420 MDS_0216 MDS_0216 MDS_0217 MDS_0217
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
MDS_2362Isocitrate lyase. (531 aa)    
Predicted Functional Partners:
glcB-2
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
 
 0.990
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
 
 0.989
acnA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
   
 
 0.926
MDS_0215
Glycolate oxidase iron-sulfur subunit.
     
 0.922
acnB
Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Belongs to the aconitase/IPM isomerase family.
     
 0.921
gcl
Glyoxylate carboligase; Belongs to the TPP enzyme family.
     
 0.920
MDS_3965
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.917
MDS_3420
Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase.
     
 0.911
MDS_0216
Glycolate oxidase FAD binding subunit.
     
 0.905
MDS_0217
Glycolate oxidase subunit GlcD.
     
 0.905
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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