STRINGSTRING
MDS_2368 MDS_2368 hflD hflD mnmA mnmA MDS_2372 MDS_2372 MDS_2367 MDS_2367 folE2 folE2 MDS_4248 MDS_4248 MDS_2363 MDS_2363 MDS_2366 MDS_2366 MDS_2364 MDS_2364 MDS_2365 MDS_2365
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_2368Hypothetical protein. (287 aa)    
Predicted Functional Partners:
hflD
Hypothetical protein.
       0.800
mnmA
tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.800
MDS_2372
Hypothetical protein.
       0.564
MDS_2367
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.539
folE2
Putative GTP cyclohydrolase; Converts GTP to 7,8-dihydroneopterin triphosphate.
  
    0.445
MDS_4248
ABC transporter related protein.
   
    0.443
MDS_2363
NolW domain-containing protein.
       0.438
MDS_2366
Cupin 4 family protein.
       0.438
MDS_2364
Hypothetical protein.
       0.437
MDS_2365
GCN5-related N-acetyltransferase.
       0.432
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.