Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0021 | clpA | MDS_0021 | MDS_2377 | Hypothetical protein. | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | 0.756 |
MDS_0766 | MDS_1992 | MDS_0766 | MDS_1992 | Molecular chaperone-like protein. | Heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | 0.632 |
MDS_0766 | MDS_2469 | MDS_0766 | MDS_2469 | Molecular chaperone-like protein. | Peptidase S14, ClpP. | 0.665 |
MDS_0766 | clpA | MDS_0766 | MDS_2377 | Molecular chaperone-like protein. | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | 0.855 |
MDS_0766 | clpP | MDS_0766 | MDS_2203 | Molecular chaperone-like protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.605 |
MDS_0766 | grpE | MDS_0766 | MDS_3930 | Molecular chaperone-like protein. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.953 |
MDS_0766 | htpG | MDS_0766 | MDS_2273 | Molecular chaperone-like protein. | Heat shock protein 90; Molecular chaperone. Has ATPase activity. | 0.964 |
MDS_1992 | MDS_0766 | MDS_1992 | MDS_0766 | Heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | Molecular chaperone-like protein. | 0.632 |
MDS_1992 | clpA | MDS_1992 | MDS_2377 | Heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | 0.872 |
MDS_1992 | dnaK | MDS_1992 | MDS_3929 | Heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.644 |
MDS_1992 | grpE | MDS_1992 | MDS_3930 | Heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.704 |
MDS_1992 | hscA | MDS_1992 | MDS_3772 | Heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.644 |
MDS_1992 | htpG | MDS_1992 | MDS_2273 | Heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. | Heat shock protein 90; Molecular chaperone. Has ATPase activity. | 0.852 |
MDS_2469 | MDS_0766 | MDS_2469 | MDS_0766 | Peptidase S14, ClpP. | Molecular chaperone-like protein. | 0.665 |
MDS_2469 | clpA | MDS_2469 | MDS_2377 | Peptidase S14, ClpP. | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | 0.827 |
MDS_2469 | clpS | MDS_2469 | MDS_2376 | Peptidase S14, ClpP. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.641 |
MDS_2469 | dnaK | MDS_2469 | MDS_3929 | Peptidase S14, ClpP. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.605 |
MDS_2469 | grpE | MDS_2469 | MDS_3930 | Peptidase S14, ClpP. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.707 |
MDS_2469 | hscA | MDS_2469 | MDS_3772 | Peptidase S14, ClpP. | Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.605 |
MDS_2469 | htpG | MDS_2469 | MDS_2273 | Peptidase S14, ClpP. | Heat shock protein 90; Molecular chaperone. Has ATPase activity. | 0.444 |
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