STRINGSTRING
MDS_2461 MDS_2461 MDS_2472 MDS_2472 MDS_2432 MDS_2432 MDS_2426 MDS_2426 MDS_2449 MDS_2449 MDS_2423 MDS_2423 MDS_1900 MDS_1900 MDS_0917 MDS_0917
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_2461Hypothetical protein. (109 aa)    
Predicted Functional Partners:
MDS_2472
Oxidoreductase.
  
   
 0.600
MDS_2432
Alcohol dehydrogenase.
  
     0.591
MDS_2426
Short-chain dehydrogenase/reductase SDR.
  
     0.590
MDS_2449
Alcohol dehydrogenase.
  
     0.558
MDS_2423
Hypothetical protein.
 
     0.500
MDS_1900
DNA topoisomerase.
  
     0.448
MDS_0917
Heavy metal translocating P-type ATPase.
     
 0.400
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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