STRINGSTRING
MDS_2520 MDS_2520 MDS_2519 MDS_2519 MDS_2428 MDS_2428 MDS_2521 MDS_2521 MDS_2522 MDS_2522 MDS_2523 MDS_2523 MDS_2470 MDS_2470
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_2520Hypothetical protein. (106 aa)    
Predicted Functional Partners:
MDS_2519
Hypothetical protein.
       0.773
MDS_2428
Hemerythrin HHE cation binding domain-containing protein.
  
    0.637
MDS_2521
Cell division inhibitor SulA, putative.
       0.466
MDS_2522
DNA repair nucleotidyltransferase/DNA polymerase-like protein.
       0.466
MDS_2523
Error-prone DNA polymerase.
       0.466
MDS_2470
Hypothetical protein.
  
  
 0.424
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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