Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MDS_0984 | MDS_1263 | Transcriptional regulator. | AraC family transcriptional regulator. | 0.617 |
MDS_0984 | MDS_1434 | Transcriptional regulator. | AraC family transcriptional regulator. | 0.429 |
MDS_0984 | MDS_2527 | Transcriptional regulator. | AraC family transcriptional regulator. | 0.505 |
MDS_0984 | MDS_2533 | Transcriptional regulator. | Transcriptional regulator, AraC family. | 0.575 |
MDS_0984 | MDS_3503 | Transcriptional regulator. | AraC family transcriptional regulator. | 0.439 |
MDS_0984 | MDS_4725 | Transcriptional regulator. | AraC family transcriptional regulator. | 0.687 |
MDS_0984 | MDS_4908 | Transcriptional regulator. | AraC family transcriptional regulator. | 0.691 |
MDS_1263 | MDS_0984 | AraC family transcriptional regulator. | Transcriptional regulator. | 0.617 |
MDS_1263 | MDS_2527 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.501 |
MDS_1263 | MDS_3503 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.403 |
MDS_1263 | MDS_3519 | AraC family transcriptional regulator. | Transcriptional regulator. | 0.621 |
MDS_1434 | MDS_0984 | AraC family transcriptional regulator. | Transcriptional regulator. | 0.429 |
MDS_1434 | MDS_2068 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.471 |
MDS_1434 | MDS_2304 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.742 |
MDS_1434 | MDS_2527 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.622 |
MDS_1434 | MDS_2533 | AraC family transcriptional regulator. | Transcriptional regulator, AraC family. | 0.757 |
MDS_1434 | MDS_3503 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.514 |
MDS_1434 | MDS_3519 | AraC family transcriptional regulator. | Transcriptional regulator. | 0.674 |
MDS_1434 | MDS_4725 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.748 |
MDS_2068 | MDS_1434 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.471 |
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