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MDS_2535 MDS_2535 MDS_2536 MDS_2536 MDS_0922 MDS_0922 MDS_2537 MDS_2537 MDS_4033 MDS_4033 macB macB MDS_1211 MDS_1211 MDS_1242 MDS_1242 MDS_1212 MDS_1212 MDS_2342 MDS_2342 MDS_4034 MDS_4034
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
MDS_2535RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (412 aa)    
Predicted Functional Partners:
MDS_2536
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
 
 
 0.995
MDS_0922
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
 
 
 0.982
MDS_2537
RND efflux system outer membrane lipoprotein.
 
 
 0.972
MDS_4033
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
 
 
 0.935
macB
ATP-binding/permease fusion ABC transporter; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.912
MDS_1211
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
 
 
 0.910
MDS_1242
Multidrug efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.866
MDS_1212
oprM, RS05459.
 
 
 0.846
MDS_2342
RND efflux system outer membrane lipoprotein.
 
 
 0.846
MDS_4034
RND efflux system outer membrane lipoprotein.
 
 
 0.839
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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