STRINGSTRING
MDS_2665 MDS_2665 MDS_3735 MDS_3735 MDS_2666 MDS_2666 MDS_4099 MDS_4099 MDS_2667 MDS_2667 MDS_1792 MDS_1792 MDS_2668 MDS_2668 MDS_2669 MDS_2669
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_2665ErfK/YbiS/YcfS/YnhG family protein. (318 aa)    
Predicted Functional Partners:
MDS_3735
Hypothetical protein.
 
  
 0.727
MDS_2666
Hypothetical protein.
       0.624
MDS_4099
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
    
 0.587
MDS_2667
Lysophospholipase.
     
 0.538
MDS_1792
Amino acid adenylation domain-containing protein.
     
 0.458
MDS_2668
ABC transporter related protein.
  
    0.433
MDS_2669
Hypothetical protein.
  
    0.407
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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