STRINGSTRING
MDS_2691 MDS_2691 MDS_2689 MDS_2689 MDS_2690 MDS_2690 MDS_1764 MDS_1764 oadA oadA MDS_4222 MDS_4222 MDS_2688 MDS_2688 fadB fadB MDS_2116 MDS_2116 MDS_2222 MDS_2222 MDS_2614 MDS_2614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_26913-methylcrotonoyl-CoA carboxylase, alpha subunit. (642 aa)    
Predicted Functional Partners:
MDS_2689
propionyl-CoA carboxylase.
 0.999
MDS_2690
gamma-carboxygeranoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.996
MDS_1764
Oxaloacetate decarboxylase.
 
 
0.993
oadA
Pyruvate carboxylase subunit B.
 
 
0.993
MDS_4222
Pyruvate carboxylase., propionyl-CoA carboxylase.
 
0.992
MDS_2688
isovaleryl-CoA dehydrogenase.
 
 0.966
fadB
Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.953
MDS_2116
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase.
  
 0.953
MDS_2222
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.932
MDS_2614
enoyl-CoA hydratase.
  
 0.932
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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