MDS_2694 protein (Pseudomonas mendocina NK01)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

MDS_2694

Amino acid ABC transporter periplasmic protein. (249 aa)

Predicted Functional Partners:

MDS_0771

0.774

MDS_3507

0.774

MDS_1516

0.761

MDS_3342

0.741

MDS_4786

0.735

MDS_3485

0.730

MDS_1145

0.718

MDS_0332

0.707

MDS_2543

0.691

MDS_0476

0.681

Your Current Organism:

Pseudomonas mendocina NK01

NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
MDS_0332	MDS_0771	Putative lipoprotein.	Extracellular solute-binding protein.	0.761
MDS_0332	MDS_1145	Putative lipoprotein.	Extracellular solute-binding protein.	0.743
MDS_0332	MDS_2543	Putative lipoprotein.	Hypothetical protein.	0.519
MDS_0332	MDS_2694	Putative lipoprotein.	Amino acid ABC transporter periplasmic protein.	0.707
MDS_0332	MDS_3485	Putative lipoprotein.	Extracellular solute-binding protein.	0.723
MDS_0332	MDS_3507	Putative lipoprotein.	Hypothetical protein.	0.756
MDS_0476	MDS_2543	Extracellular solute-binding protein.	Hypothetical protein.	0.460
MDS_0476	MDS_2694	Extracellular solute-binding protein.	Amino acid ABC transporter periplasmic protein.	0.681
MDS_0476	MDS_3485	Extracellular solute-binding protein.	Extracellular solute-binding protein.	0.565
MDS_0771	MDS_0332	Extracellular solute-binding protein.	Putative lipoprotein.	0.761
MDS_0771	MDS_1516	Extracellular solute-binding protein.	Extracellular solute-binding protein.	0.777
MDS_0771	MDS_2543	Extracellular solute-binding protein.	Hypothetical protein.	0.657
MDS_0771	MDS_2694	Extracellular solute-binding protein.	Amino acid ABC transporter periplasmic protein.	0.774
MDS_0771	MDS_3342	Extracellular solute-binding protein.	Amino acid ABC transporter periplasmic protein.	0.768
MDS_0771	MDS_3485	Extracellular solute-binding protein.	Extracellular solute-binding protein.	0.745
MDS_1145	MDS_0332	Extracellular solute-binding protein.	Putative lipoprotein.	0.743
MDS_1145	MDS_2543	Extracellular solute-binding protein.	Hypothetical protein.	0.543
MDS_1145	MDS_2694	Extracellular solute-binding protein.	Amino acid ABC transporter periplasmic protein.	0.718
MDS_1145	MDS_3485	Extracellular solute-binding protein.	Extracellular solute-binding protein.	0.673
MDS_1145	MDS_4786	Extracellular solute-binding protein.	Amino acid ABC transporter periplasmic protein.	0.754