Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MDS_0697 | MDS_2723 | HdoD. | ABC transporter, periplasmic substrate-binding protein, putative. | 0.635 |
MDS_0697 | MDS_2728 | HdoD. | Hypothetical protein. | 0.524 |
MDS_0697 | MDS_2729 | HdoD. | Hypothetical protein. | 0.688 |
MDS_0697 | MDS_2730 | HdoD. | Hypothetical protein. | 0.415 |
MDS_0697 | MDS_3858 | HdoD. | Hypothetical protein. | 0.773 |
MDS_0697 | MDS_3860 | HdoD. | Hypothetical protein. | 0.772 |
MDS_2723 | MDS_0697 | ABC transporter, periplasmic substrate-binding protein, putative. | HdoD. | 0.635 |
MDS_2723 | MDS_2724 | ABC transporter, periplasmic substrate-binding protein, putative. | Hypothetical protein. | 0.990 |
MDS_2723 | MDS_2725 | ABC transporter, periplasmic substrate-binding protein, putative. | Cation ABC transporter, ATP-binding protein. | 0.990 |
MDS_2723 | MDS_2726 | ABC transporter, periplasmic substrate-binding protein, putative. | Periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.969 |
MDS_2723 | MDS_2727 | ABC transporter, periplasmic substrate-binding protein, putative. | Hypothetical protein. | 0.860 |
MDS_2723 | MDS_2728 | ABC transporter, periplasmic substrate-binding protein, putative. | Hypothetical protein. | 0.941 |
MDS_2723 | MDS_2729 | ABC transporter, periplasmic substrate-binding protein, putative. | Hypothetical protein. | 0.959 |
MDS_2723 | MDS_2730 | ABC transporter, periplasmic substrate-binding protein, putative. | Hypothetical protein. | 0.916 |
MDS_2723 | MDS_3858 | ABC transporter, periplasmic substrate-binding protein, putative. | Hypothetical protein. | 0.583 |
MDS_2723 | MDS_3860 | ABC transporter, periplasmic substrate-binding protein, putative. | Hypothetical protein. | 0.569 |
MDS_2724 | MDS_2723 | Hypothetical protein. | ABC transporter, periplasmic substrate-binding protein, putative. | 0.990 |
MDS_2724 | MDS_2725 | Hypothetical protein. | Cation ABC transporter, ATP-binding protein. | 0.999 |
MDS_2724 | MDS_2726 | Hypothetical protein. | Periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.998 |
MDS_2724 | MDS_2727 | Hypothetical protein. | Hypothetical protein. | 0.942 |
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