STRINGSTRING
MDS_2793 MDS_2793 puuE puuE MDS_2794 MDS_2794 MDS_1792 MDS_1792 MDS_2809 MDS_2809 MDS_2792 MDS_2792 MDS_2808 MDS_2808 MDS_0693 MDS_0693 MDS_0872 MDS_0872 MDS_2927 MDS_2927 MDS_3213 MDS_3213
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_2793Cyclic beta 1-2 glucan synthetase, putative. (2838 aa)    
Predicted Functional Partners:
puuE
Chitin deacetylase.
  
  
 0.855
MDS_2794
Hypothetical protein.
       0.797
MDS_1792
Amino acid adenylation domain-containing protein.
  
 
 0.668
MDS_2809
Transcriptional regulator, Crp/Fnr family protein.
 
 
   0.645
MDS_2792
Crp/FNR family transcriptional regulator.
 
 
   0.636
MDS_2808
Cyclic nucleotide-binding domain-containing protein.
 
 
   0.617
MDS_0693
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
  
 0.592
MDS_0872
Diguanylate cyclase/phosphodiesterase.
  
  
 0.592
MDS_2927
Hypothetical protein.
  
 
 0.590
MDS_3213
TPR repeat-containing protein.
  
 
 0.590
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.