STRINGSTRING
MDS_2826 MDS_2826 MDS_3850 MDS_3850 MDS_3849 MDS_3849 MDS_2825 MDS_2825 MDS_2827 MDS_2827 MDS_2823 MDS_2823 MDS_2822 MDS_2822 MDS_2829 MDS_2829 MDS_1596 MDS_1596
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_2826Mg++/citrate complex transporter. (423 aa)    
Predicted Functional Partners:
MDS_3850
Hypothetical protein.
 
     0.582
MDS_3849
Hypothetical protein.
 
     0.552
MDS_2825
Hypothetical protein.
       0.542
MDS_2827
DNA binding domain-containing protein.
  
  
 0.536
MDS_2823
Hypothetical protein.
 
     0.482
MDS_2822
Hypothetical protein.
 
     0.462
MDS_2829
Membrane protein AbrB duplication.
 
     0.436
MDS_1596
Dicarboxylate carrier MatC domain-containing protein.
  
     0.402
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.