STRINGSTRING
MDS_2914 MDS_2914 MDS_2915 MDS_2915 MDS_2071 MDS_2071 MDS_0303 MDS_0303 MDS_0150 MDS_0150 MDS_1107 MDS_1107 MDS_2166 MDS_2166 MDS_2487 MDS_2487 MDS_2541 MDS_2541 MDS_2774 MDS_2774 MDS_2890 MDS_2890
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_2914Hypothetical protein. (398 aa)    
Predicted Functional Partners:
MDS_2915
XRE family transcriptional regulator.
       0.800
MDS_2071
XRE family transcriptional regulator.
  
 
 0.554
MDS_0303
XRE family transcriptional regulator.
  
 
 0.529
MDS_0150
Helix-turn-helix domain-containing protein.
  
 
 0.501
MDS_1107
Hypothetical protein.
  
 
 0.501
MDS_2166
Regulatory protein, putative.
  
 
 0.501
MDS_2487
Helix-turn-helix domain-containing protein.
  
 
 0.501
MDS_2541
Putative helix-turn-helix transcriptional regulatory protein.
  
 
 0.501
MDS_2774
Putative DNA-binding protein.
  
 
 0.501
MDS_2890
Putative DNA-binding protein.
  
 
 0.501
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.