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pqqB pqqB pqqC pqqC pqqE pqqE pqqD pqqD MDS_2944 MDS_2944 MDS_2931 MDS_2931 MDS_2937 MDS_2937 MDS_2680 MDS_2680 MDS_2943 MDS_2943 MDS_2952 MDS_2952 MDS_2951 MDS_2951
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
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[Homology]
Score
pqqBPyrroloquinoline quinone biosynthesis protein PqqB; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. (304 aa)    
Predicted Functional Partners:
pqqC
Pyrroloquinoline quinone biosynthesis protein PqqC; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.
  
 0.996
pqqE
Pyrroloquinoline quinone biosynthesis protein PqqE; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
 
  
 0.983
pqqD
Pyrroloquinoline quinone biosynthesis protein PqqD; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.
 
  
 0.982
MDS_2944
Pyrrolo-quinoline quinone.
 
  
 0.856
MDS_2931
Peptidase S9 prolyl oligopeptidase.
 
  
 0.849
MDS_2937
Pyrrolo-quinoline quinone.
 
  
 0.832
MDS_2680
Methanol/ethanol family PQQ-dependent dehydrogenase.
 
  
 0.766
MDS_2943
Hypothetical protein.
 
  
 0.762
MDS_2952
YVTN beta-propeller repeat-containing protein.
  
     0.721
MDS_2951
ABC-type branched-chain amino acid transport systems periplasmic component-like protein.
  
     0.703
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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