STRINGSTRING
MDS_3094 MDS_3094 MDS_0691 MDS_0691 MDS_1024 MDS_1024 MDS_0319 MDS_0319 MDS_1638 MDS_1638 MDS_0156 MDS_0156 MDS_2634 MDS_2634 MDS_3232 MDS_3232 MDS_2322 MDS_2322 MDS_3876 MDS_3876 MDS_4730 MDS_4730
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_3094Hypothetical protein. (159 aa)    
Predicted Functional Partners:
MDS_0691
Hypothetical protein.
  
     0.750
MDS_1024
Multi-sensor signal transduction histidine kinase.
  
     0.737
MDS_0319
Hypothetical protein.
  
     0.711
MDS_1638
Hypothetical protein.
  
     0.696
MDS_0156
Hypothetical protein.
  
     0.669
MDS_2634
Hypothetical protein.
  
    0.621
MDS_3232
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
  
     0.613
MDS_2322
CHAD domain-containing protein.
  
     0.611
MDS_3876
Pentapeptide repeat-containing protein.
  
     0.611
MDS_4730
Putative signal transduction protein.
  
     0.601
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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