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MDS_3126 MDS_3126 MDS_3125 MDS_3125 ppx ppx ndk ndk MDS_4721 MDS_4721 pyk pyk pyk-2 pyk-2 MDS_3028 MDS_3028 MDS_0329 MDS_0329 MDS_2400 MDS_2400 ribB ribB
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
MDS_3126(p)ppGpp synthetase I; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (747 aa)    
Predicted Functional Partners:
MDS_3125
Nucleoside triphosphate pyrophosphohydrolase.
 
 
 0.986
ppx
Ppx/GppA phosphatase; Belongs to the GppA/Ppx family.
  
 
 0.928
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.924
MDS_4721
(p)ppGpp synthetase I; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
  
 
0.915
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.905
pyk-2
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.905
MDS_3028
Putative adenylate/guanylate cyclase.
     
 0.903
MDS_0329
Adenylate cyclase.
     
 0.902
MDS_2400
Anaerobic ribonucleoside triphosphate reductase.
     
 0.901
ribB
Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.845
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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