STRINGSTRING
MDS_3128 MDS_3128 cysE cysE metZ metZ cysC cysC rlmD rlmD cysD cysD cysS cysS MDS_0908 MDS_0908 moaD moaD MDS_3715 MDS_3715 MDS_1792 MDS_1792
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
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[Homology]
Score
MDS_3128Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. (301 aa)    
Predicted Functional Partners:
cysE
Serine O-acetyltransferase.
 
 0.994
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 
 0.921
cysC
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.903
rlmD
23S rRNA 5-methyluridine methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.
  
    0.829
cysD
Sulfate adenylyltransferase subunit 2.
  
  
 0.828
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.750
MDS_0908
Flavodoxin/nitric oxide synthase.
  
  
 0.685
moaD
Molybdopterin synthase subunit MoaD.
  
 
 0.681
MDS_3715
Homoserine dehydrogenase.
 
 
 0.637
MDS_1792
Amino acid adenylation domain-containing protein.
  
  
 0.625
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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