Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MDS_3130 | MDS_3131 | Integral membrane sensor signal transduction histidine kinase. | Two component transcriptional regulator. | 0.996 |
MDS_3130 | MDS_3132 | Integral membrane sensor signal transduction histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.862 |
MDS_3130 | MDS_3133 | Integral membrane sensor signal transduction histidine kinase. | Hypothetical protein. | 0.432 |
MDS_3130 | MDS_3134 | Integral membrane sensor signal transduction histidine kinase. | Protein of unknown function DUF306, MetA and HslJ. | 0.498 |
MDS_3131 | MDS_3130 | Two component transcriptional regulator. | Integral membrane sensor signal transduction histidine kinase. | 0.996 |
MDS_3131 | MDS_3132 | Two component transcriptional regulator. | Multi-sensor hybrid histidine kinase. | 0.901 |
MDS_3131 | MDS_3133 | Two component transcriptional regulator. | Hypothetical protein. | 0.436 |
MDS_3131 | MDS_3134 | Two component transcriptional regulator. | Protein of unknown function DUF306, MetA and HslJ. | 0.436 |
MDS_3132 | MDS_3130 | Multi-sensor hybrid histidine kinase. | Integral membrane sensor signal transduction histidine kinase. | 0.862 |
MDS_3132 | MDS_3131 | Multi-sensor hybrid histidine kinase. | Two component transcriptional regulator. | 0.901 |
MDS_3132 | MDS_3133 | Multi-sensor hybrid histidine kinase. | Hypothetical protein. | 0.552 |
MDS_3132 | MDS_3134 | Multi-sensor hybrid histidine kinase. | Protein of unknown function DUF306, MetA and HslJ. | 0.558 |
MDS_3133 | MDS_3130 | Hypothetical protein. | Integral membrane sensor signal transduction histidine kinase. | 0.432 |
MDS_3133 | MDS_3131 | Hypothetical protein. | Two component transcriptional regulator. | 0.436 |
MDS_3133 | MDS_3132 | Hypothetical protein. | Multi-sensor hybrid histidine kinase. | 0.552 |
MDS_3133 | MDS_3134 | Hypothetical protein. | Protein of unknown function DUF306, MetA and HslJ. | 0.800 |
MDS_3134 | MDS_3130 | Protein of unknown function DUF306, MetA and HslJ. | Integral membrane sensor signal transduction histidine kinase. | 0.498 |
MDS_3134 | MDS_3131 | Protein of unknown function DUF306, MetA and HslJ. | Two component transcriptional regulator. | 0.436 |
MDS_3134 | MDS_3132 | Protein of unknown function DUF306, MetA and HslJ. | Multi-sensor hybrid histidine kinase. | 0.558 |
MDS_3134 | MDS_3133 | Protein of unknown function DUF306, MetA and HslJ. | Hypothetical protein. | 0.800 |