MDS_3138 protein (Pseudomonas mendocina NK01)

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second shell of interactors

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

MDS_3138

RNA-binding S4 domain-containing protein. (245 aa)

Predicted Functional Partners:

tsaA

0.672

MDS_3139

0.645

rimO

0.626

cmk

0.624

MDS_2334

0.573

MDS_4714

0.573

rlmL

0.568

scpB

0.553

MDS_3136

0.519

MDS_3141

0.461

Your Current Organism:

Pseudomonas mendocina NK01

NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MDS_2334	MDS_3138	MDS_2334	MDS_3138	Exonuclease III.	RNA-binding S4 domain-containing protein.	0.573
MDS_2334	MDS_4714	MDS_2334	MDS_4714	Exonuclease III.	Exodeoxyribonuclease III Xth.	0.918
MDS_2334	rlmL	MDS_2334	MDS_3287	Exonuclease III.	23S rRNA m(2)G2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.	0.472
MDS_3136	MDS_3138	MDS_3136	MDS_3138	Cytochrome b561.	RNA-binding S4 domain-containing protein.	0.519
MDS_3136	rimO	MDS_3136	MDS_3137	Cytochrome b561.	Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.	0.862
MDS_3138	MDS_2334	MDS_3138	MDS_2334	RNA-binding S4 domain-containing protein.	Exonuclease III.	0.573
MDS_3138	MDS_3136	MDS_3138	MDS_3136	RNA-binding S4 domain-containing protein.	Cytochrome b561.	0.519
MDS_3138	MDS_3139	MDS_3138	MDS_3139	RNA-binding S4 domain-containing protein.	Hypothetical protein.	0.645
MDS_3138	MDS_3141	MDS_3138	MDS_3141	RNA-binding S4 domain-containing protein.	Short-chain dehydrogenase/reductase SDR.	0.461
MDS_3138	MDS_4714	MDS_3138	MDS_4714	RNA-binding S4 domain-containing protein.	Exodeoxyribonuclease III Xth.	0.573
MDS_3138	cmk	MDS_3138	MDS_1959	RNA-binding S4 domain-containing protein.	Cytidylate kinase.	0.624
MDS_3138	rimO	MDS_3138	MDS_3137	RNA-binding S4 domain-containing protein.	Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.	0.626
MDS_3138	rlmL	MDS_3138	MDS_3287	RNA-binding S4 domain-containing protein.	23S rRNA m(2)G2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.	0.568
MDS_3138	scpB	MDS_3138	MDS_3011	RNA-binding S4 domain-containing protein.	Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.553
MDS_3138	tsaA	MDS_3138	MDS_3140	RNA-binding S4 domain-containing protein.	Hypothetical protein.	0.672
MDS_3139	MDS_3138	MDS_3139	MDS_3138	Hypothetical protein.	RNA-binding S4 domain-containing protein.	0.645
MDS_3139	MDS_3141	MDS_3139	MDS_3141	Hypothetical protein.	Short-chain dehydrogenase/reductase SDR.	0.488
MDS_3139	rimO	MDS_3139	MDS_3137	Hypothetical protein.	Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.	0.480
MDS_3139	tsaA	MDS_3139	MDS_3140	Hypothetical protein.	Hypothetical protein.	0.785
MDS_3141	MDS_3138	MDS_3141	MDS_3138	Short-chain dehydrogenase/reductase SDR.	RNA-binding S4 domain-containing protein.	0.461