STRINGSTRING
MDS_3151 MDS_3151 MDS_3152 MDS_3152 MDS_3153 MDS_3153 MDS_1792 MDS_1792 MDS_1426 MDS_1426 MDS_3047 MDS_3047 MDS_3155 MDS_3155 MDS_3814 MDS_3814 MDS_4322 MDS_4322 MDS_3154 MDS_3154 MDS_0375 MDS_0375
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_3151ABC transporter related protein. (593 aa)    
Predicted Functional Partners:
MDS_3152
DsbA oxidoreductase.
 
    0.849
MDS_3153
Hypothetical protein; Belongs to the UPF0176 family.
       0.800
MDS_1792
Amino acid adenylation domain-containing protein.
  
 
 0.756
MDS_1426
ABC transporter-like protein.
 
 
 
0.609
MDS_3047
ABC transporter related protein.
 
 
 
0.606
MDS_3155
Hypothetical protein.
 
     0.605
MDS_3814
ATPase central domain-containing protein.
   
 0.528
MDS_4322
ATPase central domain-containing protein.
   
 0.522
MDS_3154
Transcriptional regulator BolA; Belongs to the BolA/IbaG family.
       0.501
MDS_0375
ABC transporter related protein.
  
0.496
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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