STRINGSTRING
MDS_3155 MDS_3155 MDS_3154 MDS_3154 MDS_0691 MDS_0691 MDS_1766 MDS_1766 MDS_3232 MDS_3232 MDS_4234 MDS_4234 MDS_1076 MDS_1076 MDS_2322 MDS_2322 MDS_1079 MDS_1079 MDS_4783 MDS_4783 MDS_3151 MDS_3151
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_3155Hypothetical protein. (165 aa)    
Predicted Functional Partners:
MDS_3154
Transcriptional regulator BolA; Belongs to the BolA/IbaG family.
  
    0.895
MDS_0691
Hypothetical protein.
  
     0.749
MDS_1766
Alginate biosynthesis transcriptional activator.
  
   
 0.654
MDS_3232
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
 
     0.636
MDS_4234
Hypothetical protein.
  
     0.634
MDS_1076
Hypothetical protein.
  
     0.622
MDS_2322
CHAD domain-containing protein.
  
     0.617
MDS_1079
Sel1 domain-containing protein.
  
     0.612
MDS_4783
Hypothetical protein.
  
     0.612
MDS_3151
ABC transporter related protein.
 
     0.605
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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