Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1756 | MDS_1956 | MDS_1756 | MDS_1956 | Aspartate kinase; Belongs to the aspartokinase family. | Prephenate dehydratase. | 0.701 |
MDS_1756 | MDS_1999 | MDS_1756 | MDS_1999 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.942 |
MDS_1756 | MDS_3715 | MDS_1756 | MDS_3715 | Aspartate kinase; Belongs to the aspartokinase family. | Homoserine dehydrogenase. | 0.942 |
MDS_1756 | asd | MDS_1756 | MDS_1998 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.985 |
MDS_1756 | dapA | MDS_1756 | MDS_3192 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.685 |
MDS_1756 | dapA-2 | MDS_1756 | MDS_3701 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.653 |
MDS_1756 | dapB | MDS_1756 | MDS_3927 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.804 |
MDS_1756 | lysA | MDS_1756 | MDS_0324 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.824 |
MDS_1956 | MDS_1756 | MDS_1956 | MDS_1756 | Prephenate dehydratase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.701 |
MDS_1956 | MDS_1999 | MDS_1956 | MDS_1999 | Prephenate dehydratase. | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.487 |
MDS_1956 | MDS_3715 | MDS_1956 | MDS_3715 | Prephenate dehydratase. | Homoserine dehydrogenase. | 0.877 |
MDS_1956 | asd | MDS_1956 | MDS_1998 | Prephenate dehydratase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.567 |
MDS_1956 | dapA | MDS_1956 | MDS_3192 | Prephenate dehydratase. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.828 |
MDS_1956 | dapA-2 | MDS_1956 | MDS_3701 | Prephenate dehydratase. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.828 |
MDS_1956 | dapB | MDS_1956 | MDS_3927 | Prephenate dehydratase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.574 |
MDS_1956 | gatC | MDS_1956 | MDS_0943 | Prephenate dehydratase. | aspartyl/glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.521 |
MDS_1956 | lysA | MDS_1956 | MDS_0324 | Prephenate dehydratase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.494 |
MDS_1999 | MDS_1756 | MDS_1999 | MDS_1756 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Aspartate kinase; Belongs to the aspartokinase family. | 0.942 |
MDS_1999 | MDS_1956 | MDS_1999 | MDS_1956 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Prephenate dehydratase. | 0.487 |
MDS_1999 | MDS_3715 | MDS_1999 | MDS_3715 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Homoserine dehydrogenase. | 0.957 |
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