Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0146 | MDS_2622 | MDS_0146 | MDS_2622 | Copper-containing nitrite reductase. | Nitrite transporter. | 0.906 |
MDS_0146 | MDS_2624 | MDS_0146 | MDS_2624 | Copper-containing nitrite reductase. | Assimilatory nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.905 |
MDS_0146 | MDS_2626 | MDS_0146 | MDS_2626 | Copper-containing nitrite reductase. | Assimilatory nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.900 |
MDS_0146 | MDS_3259 | MDS_0146 | MDS_3259 | Copper-containing nitrite reductase. | Periplasmic nitrate reductase subunit NapB; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. | 0.923 |
MDS_0146 | napA | MDS_0146 | MDS_3258 | Copper-containing nitrite reductase. | Nitrate reductase catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.905 |
MDS_0146 | nirD | MDS_0146 | MDS_2625 | Copper-containing nitrite reductase. | Assimilatory nitrite reductase. | 0.900 |
MDS_0590 | MDS_2624 | MDS_0590 | MDS_2624 | ABC transporter nitrate-binding protein. | Assimilatory nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.542 |
MDS_0590 | MDS_2626 | MDS_0590 | MDS_2626 | ABC transporter nitrate-binding protein. | Assimilatory nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.956 |
MDS_0590 | MDS_3259 | MDS_0590 | MDS_3259 | ABC transporter nitrate-binding protein. | Periplasmic nitrate reductase subunit NapB; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. | 0.900 |
MDS_0590 | napA | MDS_0590 | MDS_3258 | ABC transporter nitrate-binding protein. | Nitrate reductase catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.904 |
MDS_0590 | nirD | MDS_0590 | MDS_2625 | ABC transporter nitrate-binding protein. | Assimilatory nitrite reductase. | 0.455 |
MDS_2622 | MDS_0146 | MDS_2622 | MDS_0146 | Nitrite transporter. | Copper-containing nitrite reductase. | 0.906 |
MDS_2622 | MDS_2624 | MDS_2622 | MDS_2624 | Nitrite transporter. | Assimilatory nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.988 |
MDS_2622 | MDS_2626 | MDS_2622 | MDS_2626 | Nitrite transporter. | Assimilatory nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.979 |
MDS_2622 | MDS_3259 | MDS_2622 | MDS_3259 | Nitrite transporter. | Periplasmic nitrate reductase subunit NapB; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. | 0.900 |
MDS_2622 | napA | MDS_2622 | MDS_3258 | Nitrite transporter. | Nitrate reductase catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.915 |
MDS_2622 | nirD | MDS_2622 | MDS_2625 | Nitrite transporter. | Assimilatory nitrite reductase. | 0.984 |
MDS_2624 | MDS_0146 | MDS_2624 | MDS_0146 | Assimilatory nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Copper-containing nitrite reductase. | 0.905 |
MDS_2624 | MDS_0590 | MDS_2624 | MDS_0590 | Assimilatory nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | ABC transporter nitrate-binding protein. | 0.542 |
MDS_2624 | MDS_2622 | MDS_2624 | MDS_2622 | Assimilatory nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Nitrite transporter. | 0.988 |
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