STRINGSTRING
MDS_3268 MDS_3268 arsC arsC MDS_3267 MDS_3267 MDS_3270 MDS_3270 MDS_0669 MDS_0669 MDS_2311 MDS_2311 MDS_2982 MDS_2982 MDS_4570 MDS_4570 MDS_1349 MDS_1349 MDS_4814 MDS_4814 MDS_3265 MDS_3265
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_3268Membrane protein-like protein. (136 aa)    
Predicted Functional Partners:
arsC
Arsenate reductase.
       0.800
MDS_3267
Flavodoxin/nitric oxide synthase; Belongs to the WrbA family.
       0.800
MDS_3270
Hypothetical protein.
       0.798
MDS_0669
LmbE family protein.
  
     0.742
MDS_2311
Hypothetical protein.
  
     0.709
MDS_2982
Hypothetical protein.
  
     0.694
MDS_4570
Hypothetical protein.
 
     0.657
MDS_1349
Sel1 domain-containing protein.
  
     0.609
MDS_4814
Nucleic acid binding protein.
  
     0.608
MDS_3265
tRNA-processing RNAse BN.
  
    0.607
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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