Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1792 | MDS_2359 | MDS_1792 | MDS_2359 | Amino acid adenylation domain-containing protein. | Hypothetical protein. | 0.944 |
MDS_1792 | MDS_3265 | MDS_1792 | MDS_3265 | Amino acid adenylation domain-containing protein. | tRNA-processing RNAse BN. | 0.433 |
MDS_1792 | MDS_3270 | MDS_1792 | MDS_3270 | Amino acid adenylation domain-containing protein. | Hypothetical protein. | 0.794 |
MDS_1792 | arsC | MDS_1792 | MDS_3266 | Amino acid adenylation domain-containing protein. | Arsenate reductase. | 0.481 |
MDS_2245 | MDS_3270 | MDS_2245 | MDS_3270 | Hypothetical protein. | Hypothetical protein. | 0.424 |
MDS_2359 | MDS_1792 | MDS_2359 | MDS_1792 | Hypothetical protein. | Amino acid adenylation domain-containing protein. | 0.944 |
MDS_2359 | MDS_3270 | MDS_2359 | MDS_3270 | Hypothetical protein. | Hypothetical protein. | 0.457 |
MDS_3265 | MDS_1792 | MDS_3265 | MDS_1792 | tRNA-processing RNAse BN. | Amino acid adenylation domain-containing protein. | 0.433 |
MDS_3265 | MDS_3267 | MDS_3265 | MDS_3267 | tRNA-processing RNAse BN. | Flavodoxin/nitric oxide synthase; Belongs to the WrbA family. | 0.585 |
MDS_3265 | MDS_3268 | MDS_3265 | MDS_3268 | tRNA-processing RNAse BN. | Membrane protein-like protein. | 0.607 |
MDS_3265 | MDS_3270 | MDS_3265 | MDS_3270 | tRNA-processing RNAse BN. | Hypothetical protein. | 0.539 |
MDS_3265 | arsC | MDS_3265 | MDS_3266 | tRNA-processing RNAse BN. | Arsenate reductase. | 0.612 |
MDS_3267 | MDS_3265 | MDS_3267 | MDS_3265 | Flavodoxin/nitric oxide synthase; Belongs to the WrbA family. | tRNA-processing RNAse BN. | 0.585 |
MDS_3267 | MDS_3268 | MDS_3267 | MDS_3268 | Flavodoxin/nitric oxide synthase; Belongs to the WrbA family. | Membrane protein-like protein. | 0.800 |
MDS_3267 | MDS_3270 | MDS_3267 | MDS_3270 | Flavodoxin/nitric oxide synthase; Belongs to the WrbA family. | Hypothetical protein. | 0.798 |
MDS_3267 | arsC | MDS_3267 | MDS_3266 | Flavodoxin/nitric oxide synthase; Belongs to the WrbA family. | Arsenate reductase. | 0.842 |
MDS_3268 | MDS_3265 | MDS_3268 | MDS_3265 | Membrane protein-like protein. | tRNA-processing RNAse BN. | 0.607 |
MDS_3268 | MDS_3267 | MDS_3268 | MDS_3267 | Membrane protein-like protein. | Flavodoxin/nitric oxide synthase; Belongs to the WrbA family. | 0.800 |
MDS_3268 | MDS_3270 | MDS_3268 | MDS_3270 | Membrane protein-like protein. | Hypothetical protein. | 0.798 |
MDS_3268 | arsC | MDS_3268 | MDS_3266 | Membrane protein-like protein. | Arsenate reductase. | 0.800 |
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