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MDS_3343 MDS_3343 dapE dapE MDS_3345 MDS_3345 MDS_3346 MDS_3346 MDS_3342 MDS_3342 MDS_1121 MDS_1121 thiG thiG MDS_3341 MDS_3341 MDS_3339 MDS_3339
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
MDS_3343UBA/ThiF-type NAD/FAD binding protein. (269 aa)    
Predicted Functional Partners:
dapE
Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.
  
    0.573
MDS_3345
rRNA (guanine-N(1)-)-methyltransferase.
       0.554
MDS_3346
Hypothetical protein.
       0.554
MDS_3342
Amino acid ABC transporter periplasmic protein.
       0.530
MDS_1121
Molybdopterin biosynthesis protein MoeB.
 
 
0.523
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
    0.507
MDS_3341
Hypothetical protein.
       0.443
MDS_3339
Fe-S metabolism associated SufE.
   
 
 0.423
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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