STRINGSTRING
MDS_3381 MDS_3381 MDS_0680 MDS_0680 MDS_4408 MDS_4408 MDS_3798 MDS_3798 plsB plsB MDS_1332 MDS_1332 MDS_3382 MDS_3382 cysZ cysZ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_3381SH3 type 3 domain-containing protein. (218 aa)    
Predicted Functional Partners:
MDS_0680
Hypothetical protein.
  
    0.575
MDS_4408
Hypothetical protein.
  
     0.526
MDS_3798
Hypothetical protein.
  
     0.514
plsB
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
  
    0.506
MDS_1332
Carboxylate/amino acid/amine transporter.
  
   
 0.479
MDS_3382
Diguanylate phosphodiesterase.
       0.431
cysZ
Putative sulfate transport protein CysZ; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family.
 
     0.402
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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