Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0680 | MDS_3381 | MDS_0680 | MDS_3381 | Hypothetical protein. | SH3 type 3 domain-containing protein. | 0.575 |
MDS_1332 | MDS_3381 | MDS_1332 | MDS_3381 | Carboxylate/amino acid/amine transporter. | SH3 type 3 domain-containing protein. | 0.479 |
MDS_3381 | MDS_0680 | MDS_3381 | MDS_0680 | SH3 type 3 domain-containing protein. | Hypothetical protein. | 0.575 |
MDS_3381 | MDS_1332 | MDS_3381 | MDS_1332 | SH3 type 3 domain-containing protein. | Carboxylate/amino acid/amine transporter. | 0.479 |
MDS_3381 | MDS_3382 | MDS_3381 | MDS_3382 | SH3 type 3 domain-containing protein. | Diguanylate phosphodiesterase. | 0.431 |
MDS_3381 | MDS_3798 | MDS_3381 | MDS_3798 | SH3 type 3 domain-containing protein. | Hypothetical protein. | 0.514 |
MDS_3381 | MDS_4408 | MDS_3381 | MDS_4408 | SH3 type 3 domain-containing protein. | Hypothetical protein. | 0.526 |
MDS_3381 | cysZ | MDS_3381 | MDS_1063 | SH3 type 3 domain-containing protein. | Putative sulfate transport protein CysZ; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family. | 0.402 |
MDS_3381 | plsB | MDS_3381 | MDS_3360 | SH3 type 3 domain-containing protein. | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | 0.506 |
MDS_3382 | MDS_3381 | MDS_3382 | MDS_3381 | Diguanylate phosphodiesterase. | SH3 type 3 domain-containing protein. | 0.431 |
MDS_3798 | MDS_3381 | MDS_3798 | MDS_3381 | Hypothetical protein. | SH3 type 3 domain-containing protein. | 0.514 |
MDS_3798 | MDS_4408 | MDS_3798 | MDS_4408 | Hypothetical protein. | Hypothetical protein. | 0.537 |
MDS_4408 | MDS_3381 | MDS_4408 | MDS_3381 | Hypothetical protein. | SH3 type 3 domain-containing protein. | 0.526 |
MDS_4408 | MDS_3798 | MDS_4408 | MDS_3798 | Hypothetical protein. | Hypothetical protein. | 0.537 |
cysZ | MDS_3381 | MDS_1063 | MDS_3381 | Putative sulfate transport protein CysZ; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family. | SH3 type 3 domain-containing protein. | 0.402 |
plsB | MDS_3381 | MDS_3360 | MDS_3381 | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | SH3 type 3 domain-containing protein. | 0.506 |