STRINGSTRING
MDS_3411 MDS_3411 MDS_3412 MDS_3412 MDS_3413 MDS_3413 MDS_1980 MDS_1980 MDS_3146 MDS_3146 MDS_1956 MDS_1956 aroA aroA hppD hppD hisC hisC hisC-2 hisC-2 MDS_4541 MDS_4541
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
MDS_3411Phenylalanine 4-monooxygenase. (261 aa)    
Predicted Functional Partners:
MDS_3412
Pterin-4-alpha-carbinolamine dehydratase.
 
 0.995
MDS_3413
Aromatic amino acid aminotransferase.
  
 
 0.992
MDS_1980
Aromatic amino acid aminotransferase.
  
 
 0.951
MDS_3146
Homogentisate 1,2-dioxygenase.
 
  
 0.944
MDS_1956
Prephenate dehydratase.
    
 0.937
aroA
Bifunctional cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
    
 0.926
hppD
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.922
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.912
hisC-2
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.912
MDS_4541
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
     
 0.902
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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