Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1816 | MDS_1872 | MDS_1816 | MDS_1872 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | CheA signal transduction histidine kinase. | 0.870 |
MDS_1816 | MDS_2529 | MDS_1816 | MDS_2529 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Putative CheW protein. | 0.759 |
MDS_1816 | MDS_3419 | MDS_1816 | MDS_3419 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Methyl-accepting chemotaxis protein II. | 0.936 |
MDS_1816 | MDS_4139 | MDS_1816 | MDS_4139 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Putative chemotaxis sensor/effector fusion protein. | 0.931 |
MDS_1816 | MDS_4530 | MDS_1816 | MDS_4530 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | CheA signal transduction histidine kinase. | 0.865 |
MDS_1816 | MDS_4531 | MDS_1816 | MDS_4531 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | CheW protein. | 0.854 |
MDS_1816 | MDS_4533 | MDS_1816 | MDS_4533 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | CheW-like protein. | 0.857 |
MDS_1816 | MDS_4534 | MDS_1816 | MDS_4534 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.917 |
MDS_1816 | cheB | MDS_1816 | MDS_1873 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Chemotaxis-specific methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.901 |
MDS_1816 | cheW-2 | MDS_1816 | MDS_1878 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Putative CheW protein. | 0.888 |
MDS_1872 | MDS_1816 | MDS_1872 | MDS_1816 | CheA signal transduction histidine kinase. | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.870 |
MDS_1872 | MDS_2529 | MDS_1872 | MDS_2529 | CheA signal transduction histidine kinase. | Putative CheW protein. | 0.998 |
MDS_1872 | MDS_3419 | MDS_1872 | MDS_3419 | CheA signal transduction histidine kinase. | Methyl-accepting chemotaxis protein II. | 0.957 |
MDS_1872 | MDS_4139 | MDS_1872 | MDS_4139 | CheA signal transduction histidine kinase. | Putative chemotaxis sensor/effector fusion protein. | 0.609 |
MDS_1872 | MDS_4530 | MDS_1872 | MDS_4530 | CheA signal transduction histidine kinase. | CheA signal transduction histidine kinase. | 0.922 |
MDS_1872 | MDS_4531 | MDS_1872 | MDS_4531 | CheA signal transduction histidine kinase. | CheW protein. | 0.995 |
MDS_1872 | MDS_4533 | MDS_1872 | MDS_4533 | CheA signal transduction histidine kinase. | CheW-like protein. | 0.995 |
MDS_1872 | MDS_4534 | MDS_1872 | MDS_4534 | CheA signal transduction histidine kinase. | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.859 |
MDS_1872 | cheB | MDS_1872 | MDS_1873 | CheA signal transduction histidine kinase. | Chemotaxis-specific methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
MDS_1872 | cheW-2 | MDS_1872 | MDS_1878 | CheA signal transduction histidine kinase. | Putative CheW protein. | 0.996 |
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