STRINGSTRING
MDS_3426 MDS_3426 MDS_1553 MDS_1553 MDS_1554 MDS_1554 MDS_3608 MDS_3608 MDS_1792 MDS_1792 MDS_0542 MDS_0542 MDS_0543 MDS_0543 MDS_0038 MDS_0038 MDS_0033 MDS_0033 MDS_1200 MDS_1200
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_3426Phospholipid/glycerol acyltransferase. (624 aa)    
Predicted Functional Partners:
MDS_1553
long-chain-fatty-acid--CoA ligase.
  
 
 0.906
MDS_1554
long-chain-fatty-acid--CoA ligase.
 
 
 0.893
MDS_3608
AMP-dependent synthetase and ligase.
  
 
 0.717
MDS_1792
Amino acid adenylation domain-containing protein.
  
 
 0.620
MDS_0542
Membrane protein-like protein.
 
   
 0.619
MDS_0543
Hypothetical protein.
  
   
 0.551
MDS_0038
CDP-alcohol phosphatidyltransferase.
 
 
 0.481
MDS_0033
Phosphatidate cytidylyltransferase.
 
  
 0.456
MDS_1200
Hypothetical protein.
  
    0.402
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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