Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MDS_0910 | MDS_1791 | TonB-dependent receptor. | Amino acid adenylation domain-containing protein. | 0.462 |
MDS_0910 | MDS_1792 | TonB-dependent receptor. | Amino acid adenylation domain-containing protein. | 0.742 |
MDS_0910 | MDS_3427 | TonB-dependent receptor. | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.493 |
MDS_1791 | MDS_0910 | Amino acid adenylation domain-containing protein. | TonB-dependent receptor. | 0.462 |
MDS_1791 | MDS_1792 | Amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.999 |
MDS_1791 | MDS_1797 | Amino acid adenylation domain-containing protein. | MbtH domain-containing protein. | 0.993 |
MDS_1791 | MDS_3427 | Amino acid adenylation domain-containing protein. | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.765 |
MDS_1792 | MDS_0910 | Amino acid adenylation domain-containing protein. | TonB-dependent receptor. | 0.742 |
MDS_1792 | MDS_1791 | Amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.999 |
MDS_1792 | MDS_1797 | Amino acid adenylation domain-containing protein. | MbtH domain-containing protein. | 0.999 |
MDS_1792 | MDS_3427 | Amino acid adenylation domain-containing protein. | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.971 |
MDS_1797 | MDS_1791 | MbtH domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.993 |
MDS_1797 | MDS_1792 | MbtH domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.999 |
MDS_1797 | MDS_3427 | MbtH domain-containing protein. | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.604 |
MDS_3427 | MDS_0910 | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | TonB-dependent receptor. | 0.493 |
MDS_3427 | MDS_1791 | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | Amino acid adenylation domain-containing protein. | 0.765 |
MDS_3427 | MDS_1792 | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | Amino acid adenylation domain-containing protein. | 0.971 |
MDS_3427 | MDS_1797 | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | MbtH domain-containing protein. | 0.604 |
MDS_3427 | MDS_3639 | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | H-NS family protein MvaT. | 0.408 |
MDS_3427 | MDS_3781 | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | Hypothetical protein. | 0.432 |
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