Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MDS_0188 | MDS_3132 | Alginate biosynthesis sensor protein KinB. | Multi-sensor hybrid histidine kinase. | 0.568 |
MDS_0188 | MDS_3170 | Alginate biosynthesis sensor protein KinB. | Integral membrane sensor hybrid histidine protein kinase. | 0.713 |
MDS_0188 | MDS_3430 | Alginate biosynthesis sensor protein KinB. | Two component transcriptional regulator. | 0.799 |
MDS_0188 | MDS_3657 | Alginate biosynthesis sensor protein KinB. | Sensory box histidine kinase/response regulator. | 0.557 |
MDS_0188 | MDS_3950 | Alginate biosynthesis sensor protein KinB. | Multi-sensor hybrid histidine kinase. | 0.847 |
MDS_0188 | MDS_4622 | Alginate biosynthesis sensor protein KinB. | PAS/PAC sensor signal transduction histidine kinase. | 0.718 |
MDS_3020 | MDS_3132 | Integral membrane sensor signal transduction histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.671 |
MDS_3020 | MDS_3170 | Integral membrane sensor signal transduction histidine kinase. | Integral membrane sensor hybrid histidine protein kinase. | 0.839 |
MDS_3020 | MDS_3430 | Integral membrane sensor signal transduction histidine kinase. | Two component transcriptional regulator. | 0.812 |
MDS_3020 | MDS_3657 | Integral membrane sensor signal transduction histidine kinase. | Sensory box histidine kinase/response regulator. | 0.435 |
MDS_3020 | MDS_3950 | Integral membrane sensor signal transduction histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.901 |
MDS_3020 | MDS_4622 | Integral membrane sensor signal transduction histidine kinase. | PAS/PAC sensor signal transduction histidine kinase. | 0.805 |
MDS_3130 | MDS_3132 | Integral membrane sensor signal transduction histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.862 |
MDS_3130 | MDS_3170 | Integral membrane sensor signal transduction histidine kinase. | Integral membrane sensor hybrid histidine protein kinase. | 0.691 |
MDS_3130 | MDS_3430 | Integral membrane sensor signal transduction histidine kinase. | Two component transcriptional regulator. | 0.816 |
MDS_3130 | MDS_3657 | Integral membrane sensor signal transduction histidine kinase. | Sensory box histidine kinase/response regulator. | 0.536 |
MDS_3130 | MDS_3950 | Integral membrane sensor signal transduction histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.831 |
MDS_3130 | MDS_4622 | Integral membrane sensor signal transduction histidine kinase. | PAS/PAC sensor signal transduction histidine kinase. | 0.682 |
MDS_3132 | MDS_0188 | Multi-sensor hybrid histidine kinase. | Alginate biosynthesis sensor protein KinB. | 0.568 |
MDS_3132 | MDS_3020 | Multi-sensor hybrid histidine kinase. | Integral membrane sensor signal transduction histidine kinase. | 0.671 |
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