STRINGSTRING
MDS_3447 MDS_3447 MDS_3662 MDS_3662 MDS_4597 MDS_4597 MDS_1792 MDS_1792 MDS_3448 MDS_3448 MDS_1443 MDS_1443 MDS_3446 MDS_3446 bioB bioB MDS_4864 MDS_4864 MDS_3449 MDS_3449 MDS_1471 MDS_1471
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_3447Methyltransferase type 12. (247 aa)    
Predicted Functional Partners:
MDS_3662
Hypothetical protein.
  
     0.688
MDS_4597
Hypothetical protein.
  
     0.602
MDS_1792
Amino acid adenylation domain-containing protein.
     
 0.596
MDS_3448
Methyl-accepting chemotaxis sensory transducer.
  
    0.529
MDS_1443
Hypothetical protein.
  
     0.522
MDS_3446
Sterol desaturase.
       0.519
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.490
MDS_4864
Alpha/beta hydrolase fold protein.
 
  
 0.429
MDS_3449
Gluconolactonase.
 
    0.424
MDS_1471
Hypothetical protein.
  
     0.406
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.