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MDS_3536 MDS_3536 MDS_1891 MDS_1891 nagZ nagZ MDS_3537 MDS_3537 mdoG mdoG opgH opgH MDS_0899 MDS_0899 MDS_2793 MDS_2793 MDS_1792 MDS_1792 MDS_0706 MDS_0706 MDS_1825 MDS_1825
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
MDS_3536Glycoside hydrolase family 3 protein. (764 aa)    
Predicted Functional Partners:
MDS_1891
Hypothetical protein.
  
  
 0.641
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
  
   
 0.535
MDS_3537
AraC family transcriptional regulator.
       0.491
mdoG
Glucan biosynthesis protein G; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
     
 0.490
opgH
Glucosyltransferase MdoH; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
       0.479
MDS_0899
DNA-binding transcriptional regulator FruR.
 
   
 0.456
MDS_2793
Cyclic beta 1-2 glucan synthetase, putative.
     
 0.456
MDS_1792
Amino acid adenylation domain-containing protein.
     
 0.438
MDS_0706
N-acetylmuramoyl-L-alanine amidase.
     
 0.437
MDS_1825
Flagellar rod assembly protein/muramidase FlgJ.
     
 0.420
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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