STRINGSTRING
MDS_3657 MDS_3657 MDS_0791 MDS_0791 MDS_3950 MDS_3950 MDS_3170 MDS_3170 MDS_0182 MDS_0182 MDS_4622 MDS_4622 MDS_2274 MDS_2274 MDS_3132 MDS_3132 MDS_2929 MDS_2929 putA putA MDS_4626 MDS_4626
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_3657Sensory box histidine kinase/response regulator. (1162 aa)    
Predicted Functional Partners:
MDS_0791
Integral membrane sensor hybrid histidine kinase.
  
 
0.999
MDS_3950
Multi-sensor hybrid histidine kinase.
  
 
0.999
MDS_3170
Integral membrane sensor hybrid histidine protein kinase.
  
 
0.995
MDS_0182
Multi-sensor hybrid histidine kinase.
  
 
0.986
MDS_4622
PAS/PAC sensor signal transduction histidine kinase.
  
 
0.984
MDS_2274
Putative sensory box histidine kinase/response regulator.
  
 
0.973
MDS_3132
Multi-sensor hybrid histidine kinase.
 
 
0.968
MDS_2929
PAS/PAC sensor hybrid histidine kinase.
 
 
0.959
putA
Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
  
 0.947
MDS_4626
Response regulator receiver modulated diguanylate cyclase.
  
 
 0.947
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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