STRINGSTRING
MDS_3994 MDS_3994 MDS_3995 MDS_3995 cynS cynS MDS_4821 MDS_4821 MDS_1792 MDS_1792 MDS_1036 MDS_1036 MDS_2859 MDS_2859 MDS_3732 MDS_3732 MDS_4812 MDS_4812 xpt xpt apt apt
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
MDS_3994Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (243 aa)    
Predicted Functional Partners:
MDS_3995
Putative sulfate transporter.
  
 0.982
cynS
Cyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
  
 
 0.933
MDS_4821
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
 
0.901
MDS_1792
Amino acid adenylation domain-containing protein.
 
  
 0.597
MDS_1036
Putative sulfate transporter YchM.
 
  
 0.590
MDS_2859
Phenylacetic acid degradation protein PaaY.
    
 
 0.587
MDS_3732
Carbonic anhydrase.
    
 
 0.587
MDS_4812
Transferase.
    
 
 0.587
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
   
  
 0.523
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.523
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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