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MDS_4001 MDS_4001 mmsA-2 mmsA-2 mmsA mmsA panC panC fadB fadB MDS_2116 MDS_2116 MDS_3491 MDS_3491 bioD bioD MDS_3947 MDS_3947 MDS_2753 MDS_2753 MDS_2682 MDS_2682
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
MDS_4001Beta alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (448 aa)    
Predicted Functional Partners:
mmsA-2
Methylmalonate-semialdehyde dehydrogenase.
 
 
 0.992
mmsA
Methylmalonate-semialdehyde dehydrogenase.
  
 
 0.922
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.914
fadB
Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.910
MDS_2116
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase.
   
 
 0.910
MDS_3491
3-hydroxyisobutyrate dehydrogenase.
     
 0.904
bioD
Dithiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
  
 0.825
MDS_3947
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.822
MDS_2753
CoA-binding domain protein.
     
 0.802
MDS_2682
acyl-CoA dehydrogenase domain-containing protein.
   
 
  0.801
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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