STRINGSTRING
MDS_4017 MDS_4017 MDS_4010 MDS_4010 MDS_4012 MDS_4012 MDS_4011 MDS_4011 MDS_4016 MDS_4016 MDS_4018 MDS_4018 guaA guaA MDS_1917 MDS_1917
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4017Bmp family membrane protein. (360 aa)    
Predicted Functional Partners:
MDS_4010
ABC transporter related protein.
 
 
 0.993
MDS_4012
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.981
MDS_4011
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.979
MDS_4016
Hydroxydechloroatrazine ethylaminohydrolase.
 
     0.688
MDS_4018
2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
 
     0.564
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.449
MDS_1917
Hypothetical protein.
 
     0.421
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.