STRINGSTRING
MDS_4025 MDS_4025 MDS_4024 MDS_4024 MDS_4023 MDS_4023 MDS_4022 MDS_4022 MDS_4026 MDS_4026 MDS_4027 MDS_4027 MDS_3617 MDS_3617
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4025Peptidase. (464 aa)    
Predicted Functional Partners:
MDS_4024
Hypothetical protein.
  
    0.857
MDS_4023
Hypothetical protein.
       0.795
MDS_4022
Outer membrane copper receptor OprC.
  
  
 0.786
MDS_4026
Hypothetical protein.
       0.606
MDS_4027
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.464
MDS_3617
TonB-dependent receptor for iron transport protein.
 
  
 0.426
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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