STRINGSTRING
MDS_4033 MDS_4033 mexA mexA MDS_4034 MDS_4034 MDS_0921 MDS_0921 MDS_1212 MDS_1212 MDS_1210 MDS_1210 MDS_4810 MDS_4810 MDS_0684 MDS_0684 MDS_2535 MDS_2535 MDS_2976 MDS_2976 MDS_1243 MDS_1243
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4033Hydrophobe/amphiphile efflux-1 (HAE1) family protein. (1047 aa)    
Predicted Functional Partners:
mexA
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.998
MDS_4034
RND efflux system outer membrane lipoprotein.
 0.997
MDS_0921
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.988
MDS_1212
oprM, RS05459.
 0.986
MDS_1210
Efflux transporter, RND family, MFP subunit.
 0.974
MDS_4810
Outer membrane efflux protein.
 0.959
MDS_0684
TolC family type I secretion outer membrane protein.
  
 0.935
MDS_2535
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.935
MDS_2976
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.930
MDS_1243
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.921
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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