STRINGSTRING
MDS_4108 MDS_4108 MDS_1792 MDS_1792 lifO lifO MDS_3098 MDS_3098 MDS_2647 MDS_2647 MDS_2646 MDS_2646 MDS_2648 MDS_2648 MDS_3720 MDS_3720 acpP_1 acpP_1 apaH apaH MDS_0983 MDS_0983
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4108Alpha/beta hydrolase fold protein. (409 aa)    
Predicted Functional Partners:
MDS_1792
Amino acid adenylation domain-containing protein.
  
 
 0.794
lifO
Lipase chaperone; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.
  
     0.728
MDS_3098
Lipase chaperone.
  
     0.720
MDS_2647
Hypothetical protein.
  
     0.694
MDS_2646
Aromatic hydrocarbon degradation membrane protein.
  
     0.655
MDS_2648
Peptidase C39, bacteriocin processing.
  
     0.559
MDS_3720
Hypothetical protein.
  
     0.546
acpP_1
AcpP; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.542
apaH
Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.541
MDS_0983
Hypothetical protein.
  
   0.536
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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