Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0184 | MDS_3170 | MDS_0184 | MDS_3170 | CheB methylesterase. | Integral membrane sensor hybrid histidine protein kinase. | 0.909 |
MDS_0184 | MDS_3950 | MDS_0184 | MDS_3950 | CheB methylesterase. | Multi-sensor hybrid histidine kinase. | 0.965 |
MDS_0184 | MDS_4135 | MDS_0184 | MDS_4135 | CheB methylesterase. | Putative chemotaxis transducer. | 0.763 |
MDS_0184 | MDS_4136 | MDS_0184 | MDS_4136 | CheB methylesterase. | Hypothetical protein. | 0.600 |
MDS_0184 | MDS_4137 | MDS_0184 | MDS_4137 | CheB methylesterase. | Putative methyltransferase. | 0.891 |
MDS_0184 | MDS_4138 | MDS_0184 | MDS_4138 | CheB methylesterase. | CheW domain protein. | 0.546 |
MDS_0184 | MDS_4139 | MDS_0184 | MDS_4139 | CheB methylesterase. | Putative chemotaxis sensor/effector fusion protein. | 0.978 |
MDS_0184 | cheB | MDS_0184 | MDS_1873 | CheB methylesterase. | Chemotaxis-specific methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.920 |
MDS_0468 | MDS_3170 | MDS_0468 | MDS_3170 | CheB methylesterase. | Integral membrane sensor hybrid histidine protein kinase. | 0.897 |
MDS_0468 | MDS_3950 | MDS_0468 | MDS_3950 | CheB methylesterase. | Multi-sensor hybrid histidine kinase. | 0.950 |
MDS_0468 | MDS_4135 | MDS_0468 | MDS_4135 | CheB methylesterase. | Putative chemotaxis transducer. | 0.717 |
MDS_0468 | MDS_4136 | MDS_0468 | MDS_4136 | CheB methylesterase. | Hypothetical protein. | 0.664 |
MDS_0468 | MDS_4137 | MDS_0468 | MDS_4137 | CheB methylesterase. | Putative methyltransferase. | 0.871 |
MDS_0468 | MDS_4138 | MDS_0468 | MDS_4138 | CheB methylesterase. | CheW domain protein. | 0.567 |
MDS_0468 | MDS_4139 | MDS_0468 | MDS_4139 | CheB methylesterase. | Putative chemotaxis sensor/effector fusion protein. | 0.967 |
MDS_3170 | MDS_0184 | MDS_3170 | MDS_0184 | Integral membrane sensor hybrid histidine protein kinase. | CheB methylesterase. | 0.909 |
MDS_3170 | MDS_0468 | MDS_3170 | MDS_0468 | Integral membrane sensor hybrid histidine protein kinase. | CheB methylesterase. | 0.897 |
MDS_3170 | MDS_3950 | MDS_3170 | MDS_3950 | Integral membrane sensor hybrid histidine protein kinase. | Multi-sensor hybrid histidine kinase. | 0.999 |
MDS_3170 | MDS_4135 | MDS_3170 | MDS_4135 | Integral membrane sensor hybrid histidine protein kinase. | Putative chemotaxis transducer. | 0.821 |
MDS_3170 | MDS_4136 | MDS_3170 | MDS_4136 | Integral membrane sensor hybrid histidine protein kinase. | Hypothetical protein. | 0.935 |
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