STRINGSTRING
MDS_4145 MDS_4145 MDS_3146 MDS_3146 MDS_1980 MDS_1980 MDS_3413 MDS_3413 MDS_4148 MDS_4148 hppD hppD hisC hisC hisC-2 hisC-2 dadA dadA MDS_4793 MDS_4793 MDS_2856 MDS_2856
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_41454-hydroxyphenylpyruvate dioxygenase. (635 aa)    
Predicted Functional Partners:
MDS_3146
Homogentisate 1,2-dioxygenase.
 
 0.991
MDS_1980
Aromatic amino acid aminotransferase.
  
 
 0.948
MDS_3413
Aromatic amino acid aminotransferase.
  
 
 0.948
MDS_4148
Oxidoreductase protein.
 
  
 0.944
hppD
4-hydroxyphenylpyruvate dioxygenase.
 
  
0.925
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.921
hisC-2
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.921
dadA
D-amino acid dehydrogenase small subunit; Oxidative deamination of D-amino acids.
   
 
 0.909
MDS_4793
D-amino acid dehydrogenase, small subunit.
   
 
 0.909
MDS_2856
Aldehyde dehydrogenase.
  
 
 0.870
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.