Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0938 | MDS_1329 | MDS_0938 | MDS_1329 | 4-carboxymuconolactone decarboxylase. | 3-oxoadipate enol-lactonase. | 0.939 |
MDS_0938 | MDS_1792 | MDS_0938 | MDS_1792 | 4-carboxymuconolactone decarboxylase. | Amino acid adenylation domain-containing protein. | 0.595 |
MDS_0938 | MDS_4158 | MDS_0938 | MDS_4158 | 4-carboxymuconolactone decarboxylase. | 3-carboxy-cis,cis-muconate cycloisomerase. | 0.977 |
MDS_0938 | MDS_4161 | MDS_0938 | MDS_4161 | 4-carboxymuconolactone decarboxylase. | 3-oxoadipate:succinyl-CoA transferase, subunit B. | 0.570 |
MDS_0938 | MDS_4162 | MDS_0938 | MDS_4162 | 4-carboxymuconolactone decarboxylase. | 3-oxoadipate:succinyl-CoA transferase, subunit A. | 0.525 |
MDS_0938 | catA | MDS_0938 | MDS_4186 | 4-carboxymuconolactone decarboxylase. | Catechol 1,2-dioxygenase. | 0.444 |
MDS_0938 | catC | MDS_0938 | MDS_4187 | 4-carboxymuconolactone decarboxylase. | Muconolactone delta-isomerase. | 0.915 |
MDS_0938 | pcaC | MDS_0938 | MDS_4156 | 4-carboxymuconolactone decarboxylase. | 4-carboxymuconolactone decarboxylase. | 0.906 |
MDS_0938 | pcaD | MDS_0938 | MDS_4157 | 4-carboxymuconolactone decarboxylase. | 3-oxoadipate enol-lacton hydrolase. | 0.994 |
MDS_0938 | pcaG | MDS_0938 | MDS_4175 | 4-carboxymuconolactone decarboxylase. | Protocatechuate 3,4-dioxygenase, alpha subunit. | 0.760 |
MDS_1329 | MDS_0938 | MDS_1329 | MDS_0938 | 3-oxoadipate enol-lactonase. | 4-carboxymuconolactone decarboxylase. | 0.939 |
MDS_1329 | MDS_1792 | MDS_1329 | MDS_1792 | 3-oxoadipate enol-lactonase. | Amino acid adenylation domain-containing protein. | 0.794 |
MDS_1329 | MDS_4161 | MDS_1329 | MDS_4161 | 3-oxoadipate enol-lactonase. | 3-oxoadipate:succinyl-CoA transferase, subunit B. | 0.638 |
MDS_1329 | MDS_4162 | MDS_1329 | MDS_4162 | 3-oxoadipate enol-lactonase. | 3-oxoadipate:succinyl-CoA transferase, subunit A. | 0.630 |
MDS_1329 | catC | MDS_1329 | MDS_4187 | 3-oxoadipate enol-lactonase. | Muconolactone delta-isomerase. | 0.912 |
MDS_1329 | pcaC | MDS_1329 | MDS_4156 | 3-oxoadipate enol-lactonase. | 4-carboxymuconolactone decarboxylase. | 0.984 |
MDS_1329 | pcaD | MDS_1329 | MDS_4157 | 3-oxoadipate enol-lactonase. | 3-oxoadipate enol-lacton hydrolase. | 0.922 |
MDS_1792 | MDS_0938 | MDS_1792 | MDS_0938 | Amino acid adenylation domain-containing protein. | 4-carboxymuconolactone decarboxylase. | 0.595 |
MDS_1792 | MDS_1329 | MDS_1792 | MDS_1329 | Amino acid adenylation domain-containing protein. | 3-oxoadipate enol-lactonase. | 0.794 |
MDS_1792 | MDS_4158 | MDS_1792 | MDS_4158 | Amino acid adenylation domain-containing protein. | 3-carboxy-cis,cis-muconate cycloisomerase. | 0.620 |
page 1 of 5