STRINGSTRING
MDS_4210 MDS_4210 MDS_2304 MDS_2304 MDS_4918 MDS_4918 MDS_4908 MDS_4908 MDS_1721 MDS_1721 MDS_4725 MDS_4725 MDS_4910 MDS_4910 MDS_1434 MDS_1434 MDS_2533 MDS_2533 MDS_1792 MDS_1792 MDS_3516 MDS_3516
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4210DNA-binding transcriptional activator FeaR. (316 aa)    
Predicted Functional Partners:
MDS_2304
AraC family transcriptional regulator.
  
     0.538
MDS_4918
Transcriptional regulator, AraC family.
  
     0.536
MDS_4908
AraC family transcriptional regulator.
  
     0.526
MDS_1721
AraC family transcriptional regulator.
  
   0.521
MDS_4725
AraC family transcriptional regulator.
  
     0.519
MDS_4910
Transcriptional regulator.
  
   0.451
MDS_1434
AraC family transcriptional regulator.
 
   0.449
MDS_2533
Transcriptional regulator, AraC family.
  
     0.449
MDS_1792
Amino acid adenylation domain-containing protein.
     
 0.442
MDS_3516
AraC family transcriptional regulator.
  
   0.429
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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