STRINGSTRING
MDS_4252 MDS_4252 MDS_4253 MDS_4253 MDS_4255 MDS_4255 MDS_4254 MDS_4254 MDS_4256 MDS_4256 MDS_4251 MDS_4251 tolR tolR MDS_1667 MDS_1667 MDS_4423 MDS_4423 MDS_3169 MDS_3169 MDS_1804 MDS_1804
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
MDS_4252TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (227 aa)    
Predicted Functional Partners:
MDS_4253
Biopolymer transport protein ExbD/TolR.
 
 
 0.988
MDS_4255
MotA/TolQ/ExbB proton channel.
 
 
 0.981
MDS_4254
MotA/TolQ/ExbB proton channel.
 
 
 0.973
MDS_4256
Hypothetical protein.
 
   
 0.950
MDS_4251
Hypothetical protein.
 
     0.941
tolR
Biopolymer transport protein ExbD/TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.845
MDS_1667
Biopolymer transport protein ExbD/TolR.
 
 
 0.835
MDS_4423
TonB-dependent siderophore receptor.
 
 
 0.824
MDS_3169
Putative TonB-dependent exported protein.
 
 
 0.820
MDS_1804
TonB-dependent siderophore receptor.
 
 
 0.809
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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